Phatr6433 protein (Phaeodactylum tricornutum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

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Score

Phatr6433

Predicted protein (143 aa)

Predicted Functional Partners:

Phatr38130

0.942

Phatr18620

0.915

Phatr11271

0.868

Phatr19669

0.860

Phatr32097

0.841

Phatr30898

0.841

Phatr31375

0.841

Phatr11901

0.841

Phatr49220

0.830

Phatr38893

0.823

Your Current Organism:

Phaeodactylum tricornutum

NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Phatr11271	Phatr11901	Predicted protein	Predicted protein	0.914
Phatr11271	Phatr18620	Predicted protein	Predicted protein; Belongs to the SNF7 family	0.955
Phatr11271	Phatr19669	Predicted protein	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process	0.890
Phatr11271	Phatr30898	Predicted protein	Vacuolar protein; Belongs to the AAA ATPase family	0.882
Phatr11271	Phatr31375	Predicted protein	Predicted protein	0.914
Phatr11271	Phatr32097	Predicted protein	Predicted protein	0.882
Phatr11271	Phatr38130	Predicted protein	Predicted protein; Belongs to the SNF7 family	0.947
Phatr11271	Phatr38893	Predicted protein	Predicted protein	0.874
Phatr11271	Phatr49220	Predicted protein	Predicted protein; Belongs to the SNF7 family	0.904
Phatr11271	Phatr6433	Predicted protein	Predicted protein	0.868
Phatr11901	Phatr11271	Predicted protein	Predicted protein	0.914
Phatr11901	Phatr18620	Predicted protein	Predicted protein; Belongs to the SNF7 family	0.873
Phatr11901	Phatr19669	Predicted protein	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process	0.815
Phatr11901	Phatr30898	Predicted protein	Vacuolar protein; Belongs to the AAA ATPase family	0.848
Phatr11901	Phatr32097	Predicted protein	Predicted protein	0.848
Phatr11901	Phatr38130	Predicted protein	Predicted protein; Belongs to the SNF7 family	0.924
Phatr11901	Phatr38893	Predicted protein	Predicted protein	0.794
Phatr11901	Phatr49220	Predicted protein	Predicted protein; Belongs to the SNF7 family	0.831
Phatr11901	Phatr6433	Predicted protein	Predicted protein	0.841
Phatr18620	Phatr11271	Predicted protein; Belongs to the SNF7 family	Predicted protein	0.955

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