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Phatr6454 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6454" - 3,4-dihydroxy-2-butanone 4-phosphate synthase in Phaeodactylum tricornutum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr64543,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (194 aa)    
Predicted Functional Partners:
Phatr7173
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (143 aa)
 
  0.998
Phatr10882
Predicted protein (148 aa)
 
 
  0.980
Phatr38165
Predicted protein (232 aa)
 
  0.980
Phatr33427
Predicted protein (386 aa)
 
  0.901
Phatr47432
Predicted protein (281 aa)
 
  0.897
NDK2
Nucleoside diphosphate kinase (148 aa)
         
  0.870
NDK1
Nucleoside diphosphate kinase (152 aa)
         
  0.870
NDK3
Nucleoside diphosphate kinase (217 aa)
         
  0.870
Phatr10148
Predicted protein (129 aa)
       
    0.812
PK6
Pyruvate kinase (553 aa)
         
  0.807
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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