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Phatr6626 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6626" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6626Predicted protein (141 aa)    
Predicted Functional Partners:
Phatr15980
Predicted protein (119 aa)
   
          0.481
Phatr7660
Predicted protein (88 aa)
   
          0.473
Phatr11792
Predicted protein (278 aa)
   
          0.456
Phatr49182
Predicted protein (312 aa)
   
          0.453
Phatr48122
Predicted protein (366 aa)
   
          0.451
Phatr43619
Predicted protein (241 aa)
   
          0.449
Phatr7784
Predicted protein (79 aa)
   
          0.448
Phatr30636
Predicted protein (483 aa)
   
          0.444
Phatr41220
Predicted protein (420 aa)
   
          0.436
Phatr7136
Predicted protein (147 aa)
   
          0.432
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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