STRINGSTRING
Phatr6756 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6756" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6756Predicted protein (151 aa)    
Predicted Functional Partners:
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
     
      0.946
Phatr1690
Predicted protein (495 aa)
   
 
  0.760
Phatr26256
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity) (526 aa)
   
 
  0.681
CPS-II
Predicted protein (1542 aa)
     
      0.593
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
     
      0.593
Phatr47120
Predicted protein (748 aa)
       
  0.547
Phatr16162
Predicted protein (284 aa)
       
  0.547
Phatr11850
Predicted protein (285 aa)
       
  0.547
Phatr23286
Predicted protein (274 aa)
   
 
  0.522
Phatr16766
Predicted protein (140 aa)
   
 
  0.522
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (9%) [HD]