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STRINGSTRING
Phatr6817 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6817" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6817Predicted protein (106 aa)    
Predicted Functional Partners:
Phatr42822
Predicted protein (837 aa)
     
 
  0.473
Phatr47067
Predicted protein (1237 aa)
     
 
  0.443
Phatr20135
Predicted protein (690 aa)
     
 
  0.430
Phatr11593
Predicted protein (324 aa)
     
 
  0.427
Phatr13053
Predicted protein (725 aa)
     
 
  0.424
Phatr49469
Predicted protein (522 aa)
     
 
  0.420
Phatr26061
Predicted protein (552 aa)
     
 
  0.410
Phatr11785
Predicted protein (631 aa)
     
 
  0.401
Phatr45764
Predicted protein (1603 aa)
     
 
  0.401
Phatr45703
Predicted protein (2426 aa)
     
 
  0.401
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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