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STRINGSTRING
Phatr6834 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6834" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6834Predicted protein (143 aa)    
Predicted Functional Partners:
Phatr18087
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily (499 aa)
   
  0.994
PHATR_800
Predicted protein (505 aa)
   
  0.992
Phatr51242
Predicted protein (342 aa)
      
  0.992
Phatr1769
Predicted protein (395 aa)
       
  0.991
Phatr27735
Predicted protein (538 aa)
   
  0.980
Phatr11281
Predicted protein (169 aa)
   
 
  0.973
Phatr11131
Predicted protein (207 aa)
   
 
  0.973
Phatr15948
Predicted protein (262 aa)
   
 
  0.965
Phatr12436
Predicted protein; Belongs to the adenylate kinase family (179 aa)
   
 
  0.956
Phatr50034
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (547 aa)
   
   
  0.951
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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