STRINGSTRING
Phatr6834 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6834" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6834Predicted protein (143 aa)    
Predicted Functional Partners:
Phatr27735
Predicted protein (538 aa)
   
  0.980
Phatr18087
Adenylosuccinate lyase (499 aa)
   
  0.977
Phatr15948
Predicted protein (262 aa)
       
  0.965
PHATR_800
Predicted protein (505 aa)
        
  0.964
Phatr11281
Predicted protein (169 aa)
   
 
  0.954
Phatr11131
Predicted protein (207 aa)
   
 
  0.954
Phatr13789
Predicted protein; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP-AMP phosphotransferase and ITP-AMP phosphotransferase activities (211 aa)
   
 
  0.951
Phatr12732
Predicted protein (228 aa)
   
 
  0.951
ADK
Kinase adenylate kinase (215 aa)
   
 
  0.951
Phatr12436
Predicted protein (179 aa)
   
 
  0.950
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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