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Phatr6934 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6934" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6934Predicted protein (121 aa)    
Predicted Functional Partners:
ACC2
Biotin carboxylase (2282 aa)
     
 
  0.623
Phatr29004
Predicted protein (378 aa)
       
  0.594
Phatr18323
Predicted protein (288 aa)
       
  0.594
Phatr17226
Predicted protein (268 aa)
       
  0.594
Phatr20574
Predicted protein (720 aa)
       
      0.557
6PGDH
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (490 aa)
     
 
  0.549
Phatr13356
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) (505 aa)
     
 
  0.549
Phatr48918
Predicted protein (306 aa)
       
 
  0.530
Phatr41875
Predicted protein (302 aa)
         
  0.521
Phatr41928
Predicted protein (232 aa)
       
      0.487
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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