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STRINGSTRING
Phatr6934 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6934" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6934Predicted protein (121 aa)    
Predicted Functional Partners:
Phatr11633
Predicted protein (312 aa)
       
 
  0.696
Phatr43010
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (219 aa)
         
  0.683
Phatr44782
Kinase; Belongs to the inositol phosphokinase (IPK) family (450 aa)
     
   
  0.664
Phatr45657
Predicted protein (689 aa)
           
  0.638
Phatr48918
Predicted protein (306 aa)
     
 
  0.548
hCDK1
Mitogen-activated protein kinase (380 aa)
       
 
  0.461
hCDK7
Mitogen-activated protein kinase (358 aa)
       
 
  0.461
Phatr29004
Inositol-1-monophosphatase (378 aa)
         
  0.422
Phatr18323
Inositol-1-monophosphatase (288 aa)
         
  0.422
Phatr17226
Inositol-1-monophosphatase (268 aa)
         
  0.422
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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