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STRINGSTRING
Phatr6940 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr6940" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr6940Predicted protein; Belongs to the cytochrome P450 family (129 aa)    
Predicted Functional Partners:
Phatr10852
Predicted protein; Belongs to the sterol desaturase family (167 aa)
     
 
  0.546
PHATR_645
Terpene cyclase/mutase family member; Acetyl-coenzyme A synthetase; Belongs to the terpene cyclase/mutase family (678 aa)
   
 
  0.504
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
   
 
  0.491
Phatr17427
Predicted protein (695 aa)
   
   
  0.488
Phatr14208
Predicted protein; Belongs to the sterol desaturase family (249 aa)
     
 
  0.486
Phatr16649
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase (461 aa)
   
 
  0.432
Phatr49495
Predicted protein; Belongs to the cytochrome b5 family (288 aa)
       
 
  0.424
Phatr48260
Predicted protein (467 aa)
     
 
  0.415
Phatr30461
Predicted protein (463 aa)
     
 
  0.415
NRPS
Non ribosomal peptide synthase (1367 aa)
   
 
  0.414
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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