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CATR1 protein (Phaeodactylum tricornutum) - STRING interaction network
"CATR1" - Caltractin in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATR1Caltractin (151 aa)    
Predicted Functional Partners:
RAD4
Xeroderma pigmentosum group (857 aa)
       
  0.973
Phatr43680
Predicted protein (1458 aa)
       
 
  0.963
Phatr51157
Actin/actin like proteinPredicted protein (377 aa)
     
  0.803
ARP1
Actin related protein (391 aa)
     
  0.803
ACT1
Actin/actin like proteinPredicted protein (377 aa)
     
  0.803
Act2
Actin (377 aa)
     
  0.803
CaM2
Calmodulin (154 aa)
       
 
  0.745
CaMK2
Calcium/calmodulin-dependent protein kinase (325 aa)
       
  0.736
Phatr46210
Predicted protein (130 aa)
       
  0.736
chk2
Predicted protein (355 aa)
       
  0.736
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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