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Phatr7072 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7072" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7072Predicted protein (176 aa)    
Predicted Functional Partners:
Phatr18087
Adenylosuccinate lyase (499 aa)
     
 
    0.930
Phatr45529
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (926 aa)
     
 
    0.929
Phatr42726
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (814 aa)
     
 
    0.929
NDK2
Nucleoside diphosphate kinase (148 aa)
         
  0.927
NDK1
Nucleoside diphosphate kinase (152 aa)
         
  0.927
NDK3
Nucleoside diphosphate kinase (217 aa)
         
  0.927
Phatr39306
Predicted protein (296 aa)
         
    0.926
Phatr17523
Predicted protein (409 aa)
         
    0.926
Phatr6834
Predicted protein (143 aa)
     
 
    0.903
PK6
Pyruvate kinase (553 aa)
         
  0.900
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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