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STRINGSTRING
Phatr7072 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7072" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7072Predicted protein (176 aa)    
Predicted Functional Partners:
Phatr50886
Predicted protein (145 aa)
     
 
  0.960
Phatr31725
Predicted protein (629 aa)
   
   
  0.914
PHATR_800
Predicted protein (505 aa)
     
 
  0.911
Phatr51242
Predicted protein (342 aa)
   
 
    0.908
Phatr6834
Predicted protein (143 aa)
     
 
    0.906
Phatr18087
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily (499 aa)
     
 
    0.902
Phatr30019
Predicted protein (299 aa)
   
   
  0.901
Phatr20608
Predicted protein (830 aa)
     
 
    0.900
Phatr12732
Predicted protein; Belongs to the adenylate kinase family (228 aa)
     
 
  0.877
ADK
Kinase adenylate kinase; Belongs to the adenylate kinase family (215 aa)
     
 
  0.877
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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