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STRINGSTRING
Phatr7114 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7114" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7114Predicted protein (136 aa)    
Predicted Functional Partners:
Phatr35810
Predicted protein (202 aa)
     
 
  0.972
Phatr8363
Predicted protein (84 aa)
     
 
  0.934
Phatr22027
Predicted protein; Belongs to the small Tim family (92 aa)
     
 
  0.931
Phatr44351
Predicted protein (510 aa)
     
 
  0.913
Phatrdraft218
Predicted protein (125 aa)
     
   
  0.899
Phatr48010
Predicted protein (411 aa)
     
 
  0.898
Phatr3171
Predicted protein (220 aa)
     
 
  0.890
Phatr42559
Predicted protein (245 aa)
     
 
  0.851
Phatr47492
Predicted protein (640 aa)
     
 
  0.826
Phatr16182
Predicted protein; Belongs to the AAA ATPase family (514 aa)
     
 
  0.813
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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