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Phatr7173 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7173" - 6,7-dimethyl-8-ribityllumazine synthase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Phatr71736,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (143 aa)    
Predicted Functional Partners:
Phatr38165
Predicted protein (232 aa)
  0.999
Phatr6454
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (194 aa)
 
  0.995
Phatr47432
Predicted protein (281 aa)
 
 
  0.886
Phatr10882
Predicted protein (148 aa)
 
   
  0.863
Phatr42619
Predicted protein (494 aa)
   
   
  0.795
GFA1
Glutamine-fructose-6-phosphate transaminase (606 aa)
 
   
  0.759
Phatr45580
Coronin like protein; Belongs to the WD repeat coronin family (450 aa)
   
 
  0.703
Phatr48112
Predicted protein (387 aa)
   
   
  0.612
Phatr15423
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily (367 aa)
   
   
  0.612
Phatr33427
Predicted protein (386 aa)
   
     
  0.559
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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