STRINGSTRING
Phatr7349 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7349" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7349Predicted protein (87 aa)    
Predicted Functional Partners:
Phatr36743
Predicted protein (149 aa)
     
  0.992
Phatr20773
Predicted protein (484 aa)
     
  0.990
Phatr11965
Predicted protein (194 aa)
     
  0.990
Phatr9197
Predicted protein (64 aa)
     
  0.982
Phatr48920
Predicted protein (317 aa)
   
 
  0.976
Phatr9983
Predicted protein (123 aa)
     
  0.897
Phatrdraft1638
Predicted protein (548 aa)
     
      0.888
Phatr54743
Predicted protein (347 aa)
       
      0.870
Phatr27735
Predicted protein (538 aa)
   
        0.829
Phatr8686
40S ribosomal protein S12 (116 aa)
     
  0.822
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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