• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr7626 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7626" - Peptidylprolyl isomerase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7626Peptidylprolyl isomerase (89 aa)    
Predicted Functional Partners:
Phatr32036
Predicted protein (801 aa)
     
      0.595
Phatr19647
Predicted protein (354 aa)
     
      0.591
Phatr45356
Predicted protein (479 aa)
     
      0.585
Phatr16814
Predicted protein (662 aa)
     
      0.559
Phatr21557
Predicted protein (348 aa)
     
      0.547
Phatr8777
Predicted protein (110 aa)
     
      0.540
Phatr19552
Predicted protein (529 aa)
     
      0.535
Phatr18579
Predicted protein (510 aa)
     
      0.533
Phatr2182
Predicted protein (360 aa)
     
      0.532
BMS1
Ribosome biogenesis protein BMS1 (1096 aa)
     
      0.531
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (7%) [HD]