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STRINGSTRING
Phatr7634 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7634" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7634Predicted protein (103 aa)    
Predicted Functional Partners:
hCDK1
Mitogen-activated protein kinase (380 aa)
       
 
  0.787
hCDK7
Mitogen-activated protein kinase (358 aa)
       
 
  0.787
Phatr29561
Serine/threonine-protein phosphatase (319 aa)
     
 
  0.709
Phatr12144
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes (220 aa)
     
 
  0.655
Phatr42169
Serine/threonine-protein phosphatase (315 aa)
       
 
  0.617
Phatr14549
Predicted protein (171 aa)
     
   
  0.605
Phatr9491
Predicted protein (163 aa)
       
 
  0.576
Phatr46058
Formin like protein (2015 aa)
     
 
  0.574
Phatr44306
Predicted protein (865 aa)
     
 
  0.569
Phatr36721
Predicted protein (323 aa)
     
 
  0.565
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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