STRINGSTRING
PHATR_7646 protein (Phaeodactylum tricornutum) - STRING interaction network
"PHATR_7646" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_7646Predicted protein (137 aa)    
Predicted Functional Partners:
Phatr1690
Predicted protein (495 aa)
   
  0.992
Phatr45529
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (926 aa)
   
  0.975
Phatr42726
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (814 aa)
   
  0.975
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
   
 
  0.974
RFC3
Predicted protein (361 aa)
     
 
  0.961
MCM7
Predicted protein (618 aa)
     
   
  0.958
Phatr46855
Predicted protein (245 aa)
   
 
  0.954
Phatr9348
Predicted protein (172 aa)
   
 
  0.953
NDK2
Nucleoside diphosphate kinase (148 aa)
   
 
  0.935
NDK1
Nucleoside diphosphate kinase (152 aa)
   
 
  0.935
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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