STRINGSTRING
Phatr7660 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7660" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7660Predicted protein (88 aa)    
Predicted Functional Partners:
FtrB
Reductase of ferredoxin thioredoxin reductase (121 aa)
       
      0.640
Phatr7136
Predicted protein (147 aa)
   
   
  0.543
Phatr30636
Predicted protein (483 aa)
   
          0.517
Phatr44864
Predicted protein (492 aa)
   
          0.509
GLRXC1
Glutaredoxin (114 aa)
       
 
  0.505
Phatr51837
Predicted protein (72 aa)
       
 
  0.505
GLRX1
Glutaredoxin (105 aa)
       
 
  0.505
GLRX2
Predicted protein (114 aa)
       
 
  0.505
Phatr5617
Predicted protein (239 aa)
   
          0.487
Phatr7784
Predicted protein (79 aa)
   
          0.486
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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