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STRINGSTRING
Phatr7678 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7678" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7678Predicted protein (134 aa)    
Predicted Functional Partners:
Phatr43010
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (219 aa)
   
  0.968
Phatr47576
Predicted protein (574 aa)
     
 
  0.957
Phatr14202
Diacylglycerol kinase (312 aa)
     
 
  0.955
Phatr43773
Predicted protein (398 aa)
     
 
  0.928
Phatr12431
Predicted protein (801 aa)
     
 
  0.919
Phatr11916
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family (144 aa)
   
 
  0.864
Phatrdraft559
Predicted protein (368 aa)
         
 
0.800
LPT1
1-acyl-sn-glycerol-3-phosphate acyltransferase (399 aa)
   
 
  0.792
Phatr42446
Predicted protein (315 aa)
   
 
  0.792
Phatr20460
Predicted protein; Belongs to the membrane-bound acyltransferase family (499 aa)
     
 
  0.788
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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