STRINGSTRING
Phatr769 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr769" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr769Predicted protein (550 aa)    
Predicted Functional Partners:
Phatr43447
Predicted protein (671 aa)
     
 
  0.883
Phatr43574
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (499 aa)
     
 
  0.881
Phatr16814
Predicted protein (662 aa)
     
 
  0.880
Phatr14032
Predicted protein (467 aa)
     
 
  0.879
helicase_6
Predicted protein (476 aa)
     
      0.869
Phatr47176
Predicted protein (435 aa)
     
      0.860
Phatr25394
Predicted protein (528 aa)
     
      0.860
Phatr32036
Predicted protein (801 aa)
     
 
  0.855
Phatr47058
Predicted protein (606 aa)
     
      0.853
Phatr43105
Predicted protein (455 aa)
     
 
  0.845
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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