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Pt-KIF5 protein (Phaeodactylum tricornutum) - STRING interaction network
"Pt-KIF5" - Kinesin family-like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pt-KIF5Kinesin family-like protein (359 aa)    
Predicted Functional Partners:
Gamma-tub
Predicted protein; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (468 aa)
     
  0.900
DHC1
Predicted protein (4020 aa)
       
  0.827
Pt-KIF3
Kinesin family-like protein (953 aa)
     
0.826
Phatr50489
Predicted protein (387 aa)
     
  0.821
Aurora-A
Predicted protein (327 aa)
     
  0.821
Phatr43122
MAP65_ASE1 (620 aa)
     
  0.803
Phatr54534
Predicted protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (451 aa)
       
  0.797
Phatr21122
Predicted protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
       
  0.789
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2 (215 aa)
     
  0.750
EB1
Predicted protein (256 aa)
     
  0.742
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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