• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Pt-KIF5 protein (Phaeodactylum tricornutum) - STRING interaction network
"Pt-KIF5" - Kinesin family-like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pt-KIF5Kinesin family-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (359 aa)    
Predicted Functional Partners:
Phatr43122
MAP65_ASE1 (620 aa)
     
 
  0.744
Phatr47936
Predicted protein (2798 aa)
     
 
  0.716
Phatr10954
Predicted protein (209 aa)
     
 
  0.706
DHC1
Predicted protein (4020 aa)
     
 
  0.701
EB1
Predicted protein (256 aa)
     
 
  0.695
Pt-KIF3
Kinesin family-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (953 aa)
     
 
0.693
Gamma-tub
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (468 aa)
     
 
  0.654
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2 (215 aa)
     
 
  0.635
Phatr48134
Predicted protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (946 aa)
     
 
  0.621
Phatr21122
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
 
  0.597
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (8%) [HD]