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STRINGSTRING
Phatr7910 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7910" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7910Predicted protein (70 aa)    
Predicted Functional Partners:
Phatr31147
Probable methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) (559 aa)
   
 
  0.804
Phatr3362
Predicted protein (322 aa)
   
   
  0.477
Phatr7621
Predicted protein (80 aa)
 
   
  0.431
Phatr21116
Predicted protein; Argininosuccinate synthase (418 aa)
   
   
  0.421
Phatr38509
Arginase; Belongs to the arginase family (301 aa)
   
   
  0.419
Phatr40880
Agmatinase; Belongs to the arginase family (416 aa)
   
   
  0.411
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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