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Phatr7923 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7923" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7923Predicted protein (83 aa)    
Predicted Functional Partners:
Phatr12144
Predicted protein (220 aa)
     
 
  0.867
Phatr45356
Predicted protein (479 aa)
     
      0.834
Phatr12394
Predicted protein (260 aa)
     
 
  0.830
Phatr17772
Predicted protein (1313 aa)
       
      0.754
Phatr36743
Predicted protein (149 aa)
     
 
  0.752
Phatr25133
Predicted protein (562 aa)
     
 
  0.741
Phatr43105
Predicted protein (455 aa)
     
 
  0.724
Phatr30365
Predicted protein; Involved in the biogenesis of the 60S ribosomal subunit (677 aa)
     
 
  0.724
Phatr22868
Predicted protein (551 aa)
     
 
  0.714
Phatr19413
Predicted protein (69 aa)
     
      0.683
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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