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STRINGSTRING
Phatr7942 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr7942" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr7942Predicted protein (71 aa)    
Predicted Functional Partners:
Phatr16786
Predicted protein (716 aa)
     
 
  0.703
Phatr15472
Predicted protein (201 aa)
     
 
  0.659
HSP70G
Protein heat shock protein; Belongs to the heat shock protein 70 family (901 aa)
   
 
  0.648
BiP
ER luminal binding protein; Belongs to the heat shock protein 70 family (659 aa)
 
 
  0.586
Phatr11940
Predicted protein; Belongs to the heat shock protein 70 family (330 aa)
 
 
  0.580
HSP70A
Protein heat shock protein Hsp70 (653 aa)
 
 
  0.532
Hsp70_2
Predicted protein; Belongs to the heat shock protein 70 family (646 aa)
 
 
  0.528
Phatr10011
Predicted protein; Belongs to the heat shock protein 70 family (299 aa)
   
 
  0.492
Phatr32237
Predicted protein (259 aa)
     
        0.447
Phatr15032
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (157 aa)
   
 
  0.430
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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