STRINGSTRING
PHATR_800 protein (Phaeodactylum tricornutum) - STRING interaction network
"PHATR_800" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_800Predicted protein (505 aa)    
Predicted Functional Partners:
Phatr6834
Predicted protein (143 aa)
       
  0.964
Phatr51242
Predicted protein (342 aa)
       
  0.959
Phatr35566
Predicted protein (222 aa)
   
 
  0.954
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
   
  0.949
Phatr26256
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity) (526 aa)
   
 
  0.942
Phatr18087
Adenylosuccinate lyase (499 aa)
   
 
  0.937
Phatr13789
Predicted protein; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP-AMP phosphotransferase and ITP-AMP phosphotransferase activities (211 aa)
         
  0.930
Phatr12732
Predicted protein (228 aa)
         
  0.930
ADK
Kinase adenylate kinase (215 aa)
         
  0.930
Phatr12436
Predicted protein (179 aa)
         
  0.912
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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