STRINGSTRING
Phatr8058 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8058" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8058Predicted protein (79 aa)    
Predicted Functional Partners:
Phatr47992
Predicted protein (432 aa)
     
  0.853
CDKA2
Predicted protein (298 aa)
       
  0.712
Phatr44306
Predicted protein (865 aa)
       
  0.712
hCDK3
Predicted protein (295 aa)
       
  0.712
CDKA1
Predicted protein (290 aa)
       
  0.712
Phatr10628
Predicted protein (575 aa)
       
  0.703
Phatr48046
Predicted protein (678 aa)
     
  0.681
Phatr40634
Predicted protein (1038 aa)
     
  0.681
Phatr40278
Predicted protein (934 aa)
     
  0.681
Phatr33660
Predicted protein (253 aa)
       
 
  0.672
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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