STRINGSTRING
Phatr8154 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8154" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8154Predicted protein (80 aa)    
Predicted Functional Partners:
Phatr51271
Predicted protein (112 aa)
   
 
  0.702
Phatr22113
Bifunctional aspartokinase (870 aa)
     
 
  0.631
Phatr8940
Predicted protein (113 aa)
   
     
  0.616
Phatr8777
Predicted protein (110 aa)
     
      0.581
Phatr8045
Predicted protein (114 aa)
     
 
  0.569
Phatr8044
Predicted protein (114 aa)
     
 
  0.569
Phatr23489
Predicted protein (125 aa)
     
 
  0.569
Phatr23164
Predicted protein (489 aa)
     
 
  0.561
Phatr45356
Predicted protein (479 aa)
     
 
  0.545
Phatr16814
Predicted protein (662 aa)
     
      0.538
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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