Phatr8239 protein (Phaeodactylum tricornutum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

Phatr8239

Predicted protein (66 aa)

Predicted Functional Partners:

HSP70G

0.932

BiP

0.866

HSP70A

0.866

HSP70B

0.866

HSP70F

0.866

Phatr37406

0.866

Phatr34252

0.866

Hsp70_2

0.866

Hsp70_1

0.866

Phatr11940

0.866

Your Current Organism:

Phaeodactylum tricornutum

NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BiP	Phatr8239	Phatr54246	Phatr8239	ER luminal binding protein	Predicted protein	0.866
HSP70A	HSP70F	Phatr54019	Phatr41417	Protein heat shock protein Hsp70	Heat shock protein Hsp70	0.737
HSP70A	HSP70G	Phatr54019	Phatr55122	Protein heat shock protein Hsp70	Protein heat shock protein	0.925
HSP70A	Hsp70_1	Phatr54019	Phatr17633	Protein heat shock protein Hsp70	Predicted protein	0.469
HSP70A	Phatr34252	Phatr54019	Phatr34252	Protein heat shock protein Hsp70	Predicted protein	0.793
HSP70A	Phatr37406	Phatr54019	Phatr37406	Protein heat shock protein Hsp70	Predicted protein	0.793
HSP70A	Phatr8239	Phatr54019	Phatr8239	Protein heat shock protein Hsp70	Predicted protein	0.866
HSP70B	HSP70F	Phatr46333	Phatr41417	Protein heat shock protein	Heat shock protein Hsp70	0.760
HSP70B	HSP70G	Phatr46333	Phatr55122	Protein heat shock protein	Protein heat shock protein	0.954
HSP70B	Hsp70_1	Phatr46333	Phatr17633	Protein heat shock protein	Predicted protein	0.603
HSP70B	Phatr34252	Phatr46333	Phatr34252	Protein heat shock protein	Predicted protein	0.793
HSP70B	Phatr37406	Phatr46333	Phatr37406	Protein heat shock protein	Predicted protein	0.793
HSP70B	Phatr8239	Phatr46333	Phatr8239	Protein heat shock protein	Predicted protein	0.866
HSP70F	HSP70A	Phatr41417	Phatr54019	Heat shock protein Hsp70	Protein heat shock protein Hsp70	0.737
HSP70F	HSP70B	Phatr41417	Phatr46333	Heat shock protein Hsp70	Protein heat shock protein	0.760
HSP70F	Hsp70_1	Phatr41417	Phatr17633	Heat shock protein Hsp70	Predicted protein	0.689
HSP70F	Hsp70_2	Phatr41417	Phatr21519	Heat shock protein Hsp70	Predicted protein	0.734
HSP70F	Phatr8239	Phatr41417	Phatr8239	Heat shock protein Hsp70	Predicted protein	0.866
HSP70G	HSP70A	Phatr55122	Phatr54019	Protein heat shock protein	Protein heat shock protein Hsp70	0.925
HSP70G	HSP70B	Phatr55122	Phatr46333	Protein heat shock protein	Protein heat shock protein	0.954

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