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STRINGSTRING
Phatr8301 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8301" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8301Predicted protein (80 aa)    
Predicted Functional Partners:
Phatr46440
Predicted protein (1030 aa)
     
 
  0.857
Phatr44239
Predicted protein (1180 aa)
     
 
  0.848
Phatr46891
Predicted protein (1007 aa)
     
 
  0.847
Sec13
Predicted protein; Belongs to the WD repeat SEC13 family (330 aa)
     
 
  0.843
Phatr43499
Predicted protein (676 aa)
     
 
  0.832
Phatr35311
Predicted protein (1849 aa)
     
 
  0.725
Phatr47393
Nuclear pore protein (829 aa)
     
 
  0.712
Phatr45854
Predicted protein (1689 aa)
     
 
  0.684
Phatr43774
Predicted protein (406 aa)
     
 
  0.684
Phatr43057
Predicted protein (1315 aa)
     
 
  0.658
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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