STRINGSTRING
Phatr8365 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8365" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8365Predicted protein (76 aa)    
Predicted Functional Partners:
Phatr23164
Predicted protein (489 aa)
     
 
  0.785
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
   
  0.694
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
     
 
  0.660
Phatrdraft1682
Anthranilate synthase (927 aa)
         
  0.534
Phatr17238
Anthranilate synthase (958 aa)
         
  0.534
Phatr45401
Predicted protein (830 aa)
       
      0.516
Phatr3137
Predicted protein (392 aa)
       
      0.516
Phatrdraft800
Serine/threonine-protein phosphatase (317 aa)
     
  0.500
Phatr51017
Serine/threonine-protein phosphatase (317 aa)
     
  0.500
Phatr47351
Predicted protein (359 aa)
     
  0.500
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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