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STRINGSTRING
Phatr8445 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8445" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8445Predicted protein (67 aa)    
Predicted Functional Partners:
Phatr16987
Predicted protein; Belongs to the DEAD box helicase family (404 aa)
     
 
  0.805
Phatr46999
Predicted protein (420 aa)
     
   
  0.798
Phatr16633
Predicted protein (81 aa)
   
 
  0.773
Phatr44729
Predicted protein (699 aa)
       
 
  0.750
Phatr21039
Predicted protein (246 aa)
   
 
 
  0.714
Phatr41450
Predicted protein (291 aa)
   
 
 
  0.714
Phatr45848
Predicted protein (276 aa)
     
   
  0.672
Phatr28694
Predicted protein (316 aa)
     
   
  0.657
Phatr13360
Predicted protein (226 aa)
     
   
  0.636
Phatr8270
Predicted protein (84 aa)
   
 
 
  0.633
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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