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Phatr859 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr859" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr859Predicted protein (624 aa)    
Predicted Functional Partners:
CAT2
Carnitine o-acetyltransferase (688 aa)
   
 
0.886
CPS-II
Predicted protein (1542 aa)
       
      0.597
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
       
      0.597
PDHA1
Precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (413 aa)
       
 
  0.574
PDH1
Precursor of dehydrogenase pyruvate dehydrogenase E1, alpha and beta subunits (325 aa)
       
 
  0.574
Phatr6437
Predicted protein (212 aa)
       
      0.506
Phatr40930
Predicted protein (314 aa)
       
      0.506
ACL
Atp-citrate synthase (1082 aa)
     
 
  0.469
Phatr50408
Predicted protein (391 aa)
     
   
  0.467
Phatr47843
Predicted protein (268 aa)
     
   
  0.467
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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