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STRINGSTRING
Phatr8663 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8663" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8663Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (187 aa)    
Predicted Functional Partners:
Phatr47576
Predicted protein (574 aa)
   
   
  0.857
Phatr49252
Predicted protein (348 aa)
       
 
  0.817
Phatr6288
Predicted protein (190 aa)
         
  0.779
Phatr3262
Predicted protein (220 aa)
           
  0.695
Phatr1690
Predicted protein (495 aa)
   
   
  0.690
Phatr12431
Predicted protein (801 aa)
   
   
  0.687
Phatr41807
Predicted protein (407 aa)
   
   
  0.685
Phatr49500
Predicted protein (1011 aa)
         
  0.577
NRPS
Non ribosomal peptide synthase (1367 aa)
     
 
  0.565
Phatrdraft559
Predicted protein (368 aa)
   
 
  0.554
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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