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Phatr8686 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8686" - 40S ribosomal protein S12 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr868640S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family (116 aa)    
Predicted Functional Partners:
Phatr50701
Predicted protein; Belongs to the universal ribosomal protein uS12 family (143 aa)
   
 
  0.999
Phatr13682
Predicted protein (220 aa)
   
 
  0.999
Phatr28979
Predicted protein; Belongs to the universal ribosomal protein uL11 family (164 aa)
 
 
  0.999
Phatr51066
Predicted protein (152 aa)
     
 
  0.999
Phatr36226
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family (183 aa)
     
 
  0.999
Phatr19152
Predicted protein (157 aa)
   
 
  0.999
Phatr43840
Predicted protein (110 aa)
     
 
  0.999
Phatr21323
Predicted protein (137 aa)
 
 
  0.999
Phatr44971
Predicted protein (124 aa)
     
 
  0.999
Phatr27851
annotation not available (139 aa)
     
 
  0.999
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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