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Phatr8694 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8694" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8694Predicted protein (63 aa)    
Predicted Functional Partners:
Phatr20589
Predicted protein (434 aa)
       
  0.843
Phatr47675
Predicted protein (491 aa)
       
 
  0.769
Phatr45032
Predicted protein (1312 aa)
       
 
  0.769
Phatr41011
Predicted protein (727 aa)
       
 
  0.769
Phatr39304
Predicted protein (394 aa)
       
 
  0.769
Phatr37043
Predicted protein (643 aa)
       
 
  0.769
Phatr36476
Predicted protein (520 aa)
       
 
  0.769
Phatr50520
Predicted protein (657 aa)
       
 
  0.606
Phatr49595
Predicted protein (643 aa)
       
 
  0.606
Phatr3182
Predicted protein (341 aa)
       
 
  0.606
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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