• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr8694 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8694" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8694Predicted protein (63 aa)    
Predicted Functional Partners:
Phatr20589
Predicted protein (434 aa)
     
 
  0.932
Phatr5236
Predicted protein (271 aa)
     
   
  0.912
Phatr5702
Predicted protein (227 aa)
     
   
  0.905
Phatr31975
Predicted protein (397 aa)
           
  0.904
Phatr50848
Elongator complex protein 3; Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (544 aa)
     
 
  0.903
Phatr43627
Predicted protein (1396 aa)
       
 
  0.891
Phatr35766
Predicted protein (828 aa)
       
 
  0.865
Phatr19191
Predicted protein (289 aa)
           
  0.841
Phatr9446
Predicted protein (220 aa)
           
  0.799
MCM5
Predicted protein; Belongs to the MCM family (667 aa)
           
  0.787
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (7%) [HD]