STRINGSTRING
Phatr8755 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8755" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8755Predicted protein (501 aa)    
Predicted Functional Partners:
Phatr51120
Predicted protein (777 aa)
   
  0.826
Phatr11088
Predicted protein (1086 aa)
   
  0.823
Phatr42247
Predicted protein (467 aa)
   
   
 
0.805
Phatr29029
Predicted protein (574 aa)
   
  0.784
Phatr26837
Predicted protein (643 aa)
   
  0.784
Phatr17198
Predicted protein (1052 aa)
   
  0.778
Phatr11126
Predicted protein (513 aa)
   
  0.774
Phatrdraft552
Predicted protein (564 aa)
   
  0.758
Phatr36013
Predicted protein (573 aa)
   
  0.758
GluRS_1
Glutamate-trna ligase (523 aa)
   
  0.756
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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