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Phatr8765 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8765" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8765Predicted protein (287 aa)    
Predicted Functional Partners:
Phatr43697
Branched-chain-amino-acid aminotransferase (356 aa)
       
  0.929
Phatr32849
Predicted protein (299 aa)
       
  0.929
Phatr28585
Branched-chain-amino-acid aminotransferase (326 aa)
       
  0.929
Phatr10779
Predicted protein (359 aa)
       
  0.929
Phatr22955
Predicted protein (311 aa)
 
 
  0.917
Phatr20547
Homeobox protein (646 aa)
         
  0.912
Phatr12107
Predicted protein (460 aa)
         
  0.692
Phatr39578
Predicted protein (414 aa)
       
  0.667
Phatr16595
Annotation not available (129 aa)
       
  0.667
Phatr45509
Predicted protein (723 aa)
         
  0.641
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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