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STRINGSTRING
Phatr8765 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8765" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8765Predicted protein (287 aa)    
Predicted Functional Partners:
Phatr22955
Predicted protein (311 aa)
 
  0.997
Phatr20547
Homeobox protein (646 aa)
     
 
  0.942
Phatr43697
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family (356 aa)
       
  0.915
Phatr32849
Predicted protein (299 aa)
       
  0.915
Phatr28585
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family (326 aa)
       
  0.915
Phatr10779
Predicted protein (359 aa)
       
  0.915
Phatr17238
Anthranilate synthase (958 aa)
         
  0.789
Phatr41702
Predicted protein (671 aa)
         
  0.671
Phatr27735
Predicted protein (538 aa)
         
  0.626
Phatr34923
Predicted protein (312 aa)
         
  0.589
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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