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Phatr8810 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8810" - DNA topoisomerase in Phaeodactylum tricornutum
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Phatr8810DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (868 aa)    
Predicted Functional Partners:
Phatr47417
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1009 aa)
   
   
0.834
Phatr9529
Predicted protein (348 aa)
   
  0.821
Phatr47369
Predicted protein (1496 aa)
   
  0.821
PHATR_2089
Predicted protein (449 aa)
   
  0.821
Phatr18280
Predicted protein (504 aa)
   
  0.821
Phatr14845
Predicted protein (440 aa)
   
  0.821
ACL
Atp-citrate synthase (1082 aa)
   
   
  0.676
Rad22
Predicted protein (468 aa)
     
  0.643
RNAP-II_1
Predicted protein (319 aa)
       
 
  0.623
Phatr13566
Predicted protein (320 aa)
       
 
  0.623
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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