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STRINGSTRING
Phatr8866 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8866" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8866Predicted protein (229 aa)    
Predicted Functional Partners:
Phatrdraft165
Predicted protein (222 aa)
   
     
  0.453
Phatrdraft152
Predicted protein (222 aa)
   
     
  0.453
Phatr10291
Predicted protein; Belongs to the protein kinase superfamily (303 aa)
   
      0.449
Phatr3295
Predicted protein (156 aa)
   
          0.427
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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