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STRINGSTRING
Phatr8876 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8876" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8876Predicted protein (167 aa)    
Predicted Functional Partners:
Phatr41265
Predicted protein (304 aa)
         
  0.926
Phatr12589
Predicted protein (213 aa)
   
   
    0.872
Phatr10005
Predicted protein (212 aa)
   
 
  0.806
Phatr10089
Predicted protein (141 aa)
   
 
  0.788
Phatr48302
Predicted protein (549 aa)
     
 
  0.781
Phatr3145
Predicted protein (324 aa)
     
 
  0.772
Phatr1690
Predicted protein (495 aa)
   
   
  0.747
Phatr47067
Predicted protein (1237 aa)
         
  0.695
Phatr23429
Predicted protein (615 aa)
   
   
  0.619
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
   
  0.576
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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