STRINGSTRING
Phatr8877 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8877" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8877Predicted protein (114 aa)    
Predicted Functional Partners:
ACC2
Biotin carboxylase (2282 aa)
   
  0.947
ACC1
Acetyl-coa carboxylase (2092 aa)
     
  0.857
Phatr9890
Predicted protein (282 aa)
   
  0.754
Phatr9157
Predicted protein (299 aa)
   
  0.754
Phatr50148
Predicted protein (377 aa)
   
  0.754
Phatr48490
Predicted protein (409 aa)
   
  0.754
Phatr48157
Predicted protein (491 aa)
   
  0.754
Phatr46160
Predicted protein (484 aa)
   
  0.754
Phatr46158
Predicted protein (442 aa)
   
  0.754
Phatr45230
Predicted protein (646 aa)
   
  0.754
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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