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STRINGSTRING
Phatr8890 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8890" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8890Predicted protein (78 aa)    
Predicted Functional Partners:
Mob1
Predicted protein (214 aa)
       
 
  0.903
Phatr16032
Predicted protein; Belongs to the protein kinase superfamily (422 aa)
       
 
  0.876
Phatr25334
Predicted protein (312 aa)
     
 
  0.857
Phatr18319
Adenosylhomocysteinase (481 aa)
           
  0.777
Phatr45802
Predicted protein (2447 aa)
     
   
  0.621
Phatr9348
Predicted protein (172 aa)
           
  0.555
Phatr49666
Predicted protein (540 aa)
       
 
  0.549
Phatr48985
Predicted protein (2198 aa)
       
 
  0.549
Phatr47992
Predicted protein (432 aa)
       
 
  0.549
Phatr46212
Predicted protein (768 aa)
       
 
  0.549
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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