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Phatr8976 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8976" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8976Predicted protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (135 aa)    
Predicted Functional Partners:
Phatr29097
Predicted protein (225 aa)
   
  0.994
Phatr28562
Predicted protein (166 aa)
   
  0.994
Phatr12868
Predicted protein (121 aa)
     
  0.994
Phatr6847
Predicted protein (167 aa)
   
  0.993
Phatr17519
Predicted protein (143 aa)
   
  0.991
Phatr522
Predicted protein (743 aa)
     
  0.988
Phatr50886
Predicted protein (145 aa)
   
  0.987
Phatr21073
Predicted protein (110 aa)
     
    0.987
Phatr28147
Predicted protein (62 aa)
   
  0.987
Phatr8686
40S ribosomal protein S12 (116 aa)
   
    0.986
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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