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Phatr8976 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8976" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8976Predicted protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (135 aa)    
Predicted Functional Partners:
Phatr12868
Predicted protein (121 aa)
     
  0.998
Phatr30486
Predicted protein; Belongs to the universal ribosomal protein uS13 family (146 aa)
   
 
  0.981
Phatr50886
Predicted protein (145 aa)
   
 
  0.977
Phatr33660
Predicted protein (253 aa)
 
 
  0.977
Phatr29097
Predicted protein; Belongs to the universal ribosomal protein uS7 family (225 aa)
   
 
  0.976
Phatr23748
Predicted protein (67 aa)
     
      0.974
Phatr19314
Predicted protein (125 aa)
     
      0.974
Phatr23691
Predicted protein; Belongs to the universal ribosomal protein uS8 family (130 aa)
 
 
  0.973
Phatr46320
Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (1022 aa)
     
  0.972
Phatr16603
Predicted protein (599 aa)
   
 
  0.970
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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