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STRINGSTRING
Phatr8996 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr8996" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr8996Predicted protein (343 aa)    
Predicted Functional Partners:
Phatr46058
Formin like protein (2015 aa)
     
 
  0.933
Phatr46730
Predicted protein (1807 aa)
     
 
  0.922
Phatr8827
Predicted protein (219 aa)
   
 
  0.877
Phatr18549
Predicted protein (1250 aa)
     
 
  0.870
Phatr31423
Predicted protein (357 aa)
       
 
  0.811
Phatr18559
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family (245 aa)
 
   
 
  0.810
Phatr29223
Predicted protein; Belongs to the protein kinase superfamily (439 aa)
   
 
0.781
Phatr21660
Serine/threonine-protein kinase TOR (2400 aa)
     
 
  0.766
Phatr16786
Predicted protein (716 aa)
       
 
  0.730
Phatr48170
Predicted protein; Belongs to the protein kinase superfamily (335 aa)
   
 
0.721
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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