• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr9020 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9020" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9020Predicted protein (364 aa)    
Predicted Functional Partners:
Phatr11954
Predicted protein (149 aa)
       
 
  0.987
Phatr48846
Predicted protein; Belongs to the NARF family (627 aa)
     
 
  0.918
Phatr47020
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (306 aa)
           
  0.879
Phatr38642
Predicted protein (587 aa)
     
   
  0.792
IscU
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (160 aa)
     
   
  0.772
Phatr45826
Predicted protein (238 aa)
           
  0.736
Phatr50770
Predicted protein; Belongs to the FGGY kinase family (549 aa)
 
 
   
  0.672
Phatr7755
Predicted protein (88 aa)
           
  0.643
Phatr43649
Predicted protein (775 aa)
           
  0.643
Phatr4593
Predicted protein (182 aa)
 
 
 
  0.630
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (8%) [HD]