STRINGSTRING
Phatr9046 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9046" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9046Predicted protein (163 aa)    
Predicted Functional Partners:
Phatr31367
Predicted protein (819 aa)
   
  0.741
Tic55
Tic55 component of chloroplast import machinery (498 aa)
   
  0.716
Phatr49253
Predicted protein (566 aa)
   
  0.716
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
     
 
  0.714
Phatr24739
Predicted protein (1594 aa)
     
 
  0.714
Phatr13154
Predicted protein (885 aa)
   
 
  0.709
Phatr49591
Predicted protein (202 aa)
     
  0.615
Phatr12925
Predicted protein (255 aa)
   
   
  0.557
Phatr54560
Predicted protein (526 aa)
   
   
  0.554
Phatr54101
Predicted protein (471 aa)
   
   
  0.554
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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