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STRINGSTRING
Phatr9078 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9078" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9078Predicted protein (105 aa)    
Predicted Functional Partners:
PsbO
Oxygen-evolving enhancer protein 1 (308 aa)
   
 
  0.925
Phatr48359
Predicted protein (218 aa)
   
 
  0.908
Phatr26293
Predicted protein; Photosystem II 12 kDa extrinsic protein, chloroplastic (148 aa)
   
   
    0.870
PsbM
Photosystem II subunit (108 aa)
         
    0.800
OEE3
Oxygen-evolving enhancer protein 3 (200 aa)
         
    0.800
Phatr11022
Predicted protein (366 aa)
   
   
  0.619
Phatr13895
Predicted protein (330 aa)
   
   
  0.598
Phatr14996
Predicted protein (85 aa)
   
        0.525
Phatr43556
Predicted protein (249 aa)
   
        0.522
Phatr15980
Predicted protein (119 aa)
   
        0.522
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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