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STRINGSTRING
Phatr9143 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9143" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9143Predicted protein (304 aa)    
Predicted Functional Partners:
Phatr47058
Predicted protein (606 aa)
     
 
  0.886
Phatr40200
Predicted protein (710 aa)
       
 
  0.760
Phatr16987
Predicted protein; Belongs to the DEAD box helicase family (404 aa)
     
 
  0.747
Phatr23959
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (605 aa)
     
 
  0.639
Phatr9576
Predicted protein (254 aa)
     
 
  0.622
Phatr45848
Predicted protein (276 aa)
     
 
  0.620
Phatr9829
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (181 aa)
       
 
  0.567
Phatr44459
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (203 aa)
       
 
  0.567
Phatr46460
Predicted protein (1448 aa)
     
 
  0.525
Phatr9231
Predicted protein (107 aa)
     
 
  0.503
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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