STRINGSTRING
Phatr9143 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9143" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9143Predicted protein (304 aa)    
Predicted Functional Partners:
Phatr9576
Predicted protein (254 aa)
       
 
  0.710
Phatr43162
Predicted protein (146 aa)
       
      0.624
rps19
Predicted protein (147 aa)
       
      0.624
Phatr21659
Predicted protein (136 aa)
       
      0.624
Phatr27125
Predicted protein (115 aa)
       
 
  0.518
Phatr8185
Predicted protein (100 aa)
       
      0.510
Phatr51066
Predicted protein (152 aa)
       
      0.510
Phatr46735
Predicted protein (163 aa)
       
      0.510
Phatr36226
Predicted protein (183 aa)
       
      0.510
Phatr34146
60S ribosomal protein L6 (199 aa)
       
      0.510
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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