STRINGSTRING
Phatr9157 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9157" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9157Predicted protein (299 aa)    
Predicted Functional Partners:
Phatr47992
Predicted protein (432 aa)
   
  0.888
hCDK1
Predicted protein (380 aa)
        
  0.793
hCDK7
Predicted protein (358 aa)
        
  0.793
Phatr29223
Predicted protein (439 aa)
   
  0.778
Phatrdraft1239
Predicted protein (977 aa)
   
  0.754
Phatr8934
Predicted protein (265 aa)
   
  0.754
Phatr8877
Predicted protein (114 aa)
   
  0.754
Phatr7778
Predicted protein (102 aa)
   
  0.754
Phatr7774
Predicted protein (100 aa)
   
  0.754
PHATR_7763
Predicted protein (94 aa)
   
  0.754
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (12%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >