• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr9161 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9161" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9161Predicted protein (229 aa)    
Predicted Functional Partners:
Phatr43657
Predicted protein (425 aa)
   
   
    0.851
Phatr48010
Predicted protein (411 aa)
     
 
  0.701
Phatr3171
Predicted protein (220 aa)
     
 
  0.658
Phatr20948
Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (104 aa)
     
   
  0.573
Phatrdraft1384
SURF1-like protein; Probably involved in the biogenesis of the COX complex (343 aa)
     
   
  0.559
Phatr8363
Predicted protein (84 aa)
     
   
  0.558
Phatr22027
Predicted protein; Belongs to the small Tim family (92 aa)
           
  0.530
Phatr24006
Predicted protein (749 aa)
     
 
  0.525
Sec61alpha
Transport protein Sec61 alpha subunit; Belongs to the SecY/SEC61-alpha family (472 aa)
     
 
  0.525
Phatr11016
Predicted protein (91 aa)
       
 
  0.524
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (15%) [HD]