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STRINGSTRING
Phatr9246 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9246" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9246Predicted protein (258 aa)    
Predicted Functional Partners:
Phatr43169
Predicted protein (404 aa)
     
        0.722
Phatr11022
Predicted protein (366 aa)
     
        0.631
Phatr30466
Predicted protein (361 aa)
     
        0.624
Phatr21736
Predicted protein (192 aa)
   
        0.619
Phatr12713
Predicted protein (153 aa)
   
        0.619
Phatr41608
Predicted protein (200 aa)
   
        0.447
Phatr10847
Predicted protein (284 aa)
   
        0.432
Phatr23830
Phosphate transporter; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (497 aa)
     
        0.416
Phatr46924
Predicted protein; Belongs to the calycin superfamily. Lipocalin family (189 aa)
   
        0.415
Phatr26952
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (421 aa)
   
 
  0.405
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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